EnhancerDB
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  3. rs562605642[chr17:47187284]
Enhancers that have rs562605642[chr17:47187284]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 47176198 47191535 enh17201
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Placenta Thyroid Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs562605642[chr17:47187284]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 47187282 47187290 TBX5 JASPAR yes 54617188
chr17 47187282 47187291 ZEB1 JASPAR yes 54617189
chr17 47187282 47187297 SCRT1 JASPAR yes 54617190
chr17 47187283 47187293 FIGLA JASPAR yes 54617191
chr17 47187283 47187293 ID4 JASPAR yes 54617192
chr17 47187283 47187293 TCF3 JASPAR yes 54617193
chr17 47187283 47187293 TCF4 JASPAR yes 54617194
chr17 47187284 47187293 SNAI2 JASPAR yes 54617195
Genes associated with rs562605642[chr17:47187284], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More