EnhancerDB
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  3. rs562636728[chr1:175197351]
Enhancers that have rs562636728[chr1:175197351]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 175184751 175208860 enh747
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Blood (OCI-LY7) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Breast Spleen Heart
Transcript factors that have rs562636728[chr1:175197351]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 175195738 175198129 AR GTRD no Prostate (PC-3) 21351945
chr1 175196976 175198127 ZNF274 GTRD no Cervix (HeLa-S3) 21351946
chr1 175197048 175198131 ZNF274 GTRD no Cervix (HeLa-S3) 21351947
chr1 175197094 175198400 ZNF274 GTRD no Cervix (HeLa-S3) 21351948
chr1 175197136 175198186 ZNF274 GTRD no Cervix (HeLa-S3) 21351949
chr1 175197339 175197352 ZBTB18 JASPAR yes 33275859
chr1 175197340 175197352 PKNOX1 JASPAR yes 33275860
chr1 175197340 175197352 TGIF1 JASPAR yes 33275861
chr1 175197341 175197351 FIGLA JASPAR yes 33275863
chr1 175197341 175197351 ID4 JASPAR yes 33275864
chr1 175197341 175197351 MSC JASPAR yes 33275865
chr1 175197341 175197351 TCF3 JASPAR yes 33275866
chr1 175197341 175197351 TCF4 JASPAR yes 33275867
chr1 175197344 175197352 MGA JASPAR yes 33275868
chr1 175197344 175197352 TBX15 JASPAR yes 33275869
chr1 175197344 175197352 TBX1 JASPAR yes 33275870
chr1 175197344 175197352 TBX4 JASPAR yes 33275871
chr1 175197344 175197352 TBX5 JASPAR yes 33275872
chr1 175197344 175197357 SMAD2 JASPAR yes 33275873
chr1 175197347 175198115 ZNF274 GTRD no Cervix (HeLa-S3) 21351950
Genes associated with rs562636728[chr1:175197351], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More