EnhancerDB
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  3. rs562640705[chr3:13577209]
Enhancers that have rs562640705[chr3:13577209]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 13573389 13590495 enh20350
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs562640705[chr3:13577209]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 13577196 13577209 SMAD2 JASPAR yes 555488
chr3 13577207 13577217 BHLHE22 JASPAR yes 555489
chr3 13577207 13577217 NEUROD2 JASPAR yes 555490
chr3 13577207 13577217 OLIG2 JASPAR yes 555491
chr3 13577207 13577217 OLIG3 JASPAR yes 555492
Genes associated with rs562640705[chr3:13577209], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More