EnhancerDB
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  3. rs562666428[chr19:4984916]
Enhancers that have rs562666428[chr19:4984916]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4966316 4995955 enh4974
Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs562666428[chr19:4984916]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4984906 4984916 EMX1 JASPAR yes 112202466
chr19 4984906 4984916 EMX2 JASPAR yes 112202467
chr19 4984906 4984916 ESX1 JASPAR yes 112202468
chr19 4984906 4984916 GBX1 JASPAR yes 112202469
chr19 4984906 4984916 GBX2 JASPAR yes 112202470
chr19 4984906 4984916 GSX1 JASPAR yes 112202471
chr19 4984906 4984916 GSX2 JASPAR yes 112202472
chr19 4984906 4984916 HESX1 JASPAR yes 112202473
chr19 4984906 4984916 HOXB2 JASPAR yes 112202474
chr19 4984906 4984916 HOXB3 JASPAR yes 112202475
chr19 4984906 4984916 LBX2 JASPAR yes 112202476
chr19 4984906 4984916 LHX2 JASPAR yes 112202477
chr19 4984906 4984916 LHX6 JASPAR yes 112202478
chr19 4984906 4984916 MEOX1 JASPAR yes 112202479
chr19 4984906 4984916 MEOX2 JASPAR yes 112202480
chr19 4984906 4984916 MIXL1 JASPAR yes 112202481
chr19 4984906 4984916 MNX1 JASPAR yes 112202482
chr19 4984906 4984916 NOTO JASPAR yes 112202483
chr19 4984906 4984916 POU6F1 JASPAR yes 112202484
chr19 4984906 4984916 RAX JASPAR yes 112202485
chr19 4984907 4984920 DUXA JASPAR yes 112202506
chr19 4984908 4984918 PAX3 JASPAR yes 112202507
chr19 4984908 4984918 PAX7 JASPAR yes 112202508
chr19 4984908 4984919 PHOX2A JASPAR yes 112202509
chr19 4984908 4984919 PROP1 JASPAR yes 112202510
chr19 4984916 4984930 TLX1 JASPAR yes 112202511
chr19 4984916 4984931 HNF4A JASPAR yes 112202512
Genes associated with rs562666428[chr19:4984916], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More