EnhancerDB
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  3. rs562691554[chr17:76928793]
Enhancers that have rs562691554[chr17:76928793]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76924065 76939144 enh17419
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs562691554[chr17:76928793]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76928779 76928800 IRF1 JASPAR yes 56189951
chr17 76928783 76928798 FOXP1 JASPAR yes 56189953
chr17 76928784 76928805 IRF1 JASPAR yes 56189954
chr17 76928785 76928800 FOXP1 JASPAR yes 56189955
chr17 76928787 76928802 FOXP1 JASPAR yes 56189956
chr17 76928789 76928795 TBP TRANSFAC yes 56189957
chr17 76928791 76928805 SPI1 JASPAR yes 56189958
Genes associated with rs562691554[chr17:76928793], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More