EnhancerDB
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  3. rs562695423[chr16:1769669]
Enhancers that have rs562695423[chr16:1769669]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1759265 1774552 enh3842
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs562695423[chr16:1769669]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1769665 1769680 FOXP1 JASPAR yes 9158374
chr16 1769666 1769681 FOXP1 JASPAR yes 9158375
chr16 1769667 1769682 FOXP1 JASPAR yes 9158376
chr16 1769667 1769688 IRF1 JASPAR yes 9158377
chr16 1769668 1769683 FOXP1 JASPAR yes 9158378
chr16 1769668 1769689 IRF1 JASPAR yes 9158379
chr16 1769669 1769684 FOXP1 JASPAR yes 9158380
chr16 1769669 1769690 IRF1 JASPAR yes 9158381
Genes associated with rs562695423[chr16:1769669], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More