EnhancerDB
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  3. rs56269962[chr1:185525205]
Enhancers that have rs56269962[chr1:185525205]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 185522965 185545824 enh816
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Spleen Thymus Stomach
Transcript factors that have rs56269962[chr1:185525205]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 185525196 185525205 NKX2-8 JASPAR yes 33821614
chr1 185525196 185525206 NKX2-3 JASPAR yes 33821615
chr1 185525204 185525210 LEF1 TRANSFAC yes 33821616
chr1 185525204 185525210 TCF4 TRANSFAC yes 33821617
Genes associated with rs56269962[chr1:185525205], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More