EnhancerDB
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  3. rs562704676[chr5:158887083]
Enhancers that have rs562704676[chr5:158887083]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 158875045 158893275 enh38568
Prostate (PC-3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Uterus Heart
chr5 158886935 158887155 vista49895
VISTA
Transcript factors that have rs562704676[chr5:158887083]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 158886891 158887207 EBF1 UCSC Txn Factor no Conserved 108537243
chr5 158886913 158887211 RUNX3 UCSC Txn Factor no Conserved 108537244
chr5 158887007 158887216 SPI1 UCSC Txn Factor no Conserved 108537245
chr5 158887080 158887101 IRF1 JASPAR yes 67295436
chr5 158887080 158887101 IRF1 JASPAR yes 70750504
chr5 158887082 158887099 RXRA JASPAR yes 67295437
chr5 158887082 158887099 RXRA JASPAR yes 70750505
Genes associated with rs562704676[chr5:158887083], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More