EnhancerDB
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  3. rs562752251[chr17:55675001]
Enhancers that have rs562752251[chr17:55675001]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55673238 55692440 enh4492
Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs562752251[chr17:55675001]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55674984 55675005 IRF1 JASPAR yes 54973295
chr17 55674987 55675001 IRF7 JASPAR yes 54973297
chr17 55674989 55675001 IRF1 JASPAR yes 54973298
chr17 55674990 55675005 FOXP1 JASPAR yes 54973299
chr17 55674990 55675005 MEF2C JASPAR yes 54973300
chr17 55674990 55675011 IRF1 JASPAR yes 54973301
chr17 55674991 55675006 MEF2A JASPAR yes 54973302
chr17 55674992 55675004 FOXC2 JASPAR yes 54973303
chr17 55674992 55675004 MEF2A JASPAR yes 54973304
chr17 55674992 55675004 MEF2B JASPAR yes 54973305
chr17 55674992 55675004 MEF2D JASPAR yes 54973306
chr17 55674993 55675003 MEF2A JASPAR yes 54973307
chr17 55674996 55675017 IRF1 JASPAR yes 54973308
Genes associated with rs562752251[chr17:55675001], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More