EnhancerDB
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  3. rs562772179[chr2:216558499]
Enhancers that have rs562772179[chr2:216558499]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 216554765 216560635 enh34240
Prostate (PC-3) Liver (HepG2) Esophagus Astrocyte Liver Bone (Osteoblast) Lung (A549) Adrenal Lung (PC-9) Muscle (Myoblast) Uterus Stomach
chr2 216558345 216558652 vista34642
VISTA
Transcript factors that have rs562772179[chr2:216558499]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 216558212 216558579 EP300 UCSC Txn Factor no Conserved 108435082
chr2 216558310 216558576 FOXA1 UCSC Txn Factor no Conserved 108435083
chr2 216558311 216558571 FOS UCSC Txn Factor no Conserved 108435084
chr2 216558321 216558567 FOSL2 UCSC Txn Factor no Conserved 108435085
chr2 216558336 216558531 JUND UCSC Txn Factor no Conserved 108435086
chr2 216558478 216558499 IRF1 JASPAR yes 22204392
chr2 216558478 216558499 IRF1 JASPAR yes 80794911
chr2 216558479 216558500 IRF1 JASPAR yes 22204393
chr2 216558479 216558500 IRF1 JASPAR yes 80794912
chr2 216558483 216558504 IRF1 JASPAR yes 22204395
chr2 216558483 216558504 IRF1 JASPAR yes 80794914
chr2 216558484 216558499 FOXP1 JASPAR yes 22204396
chr2 216558484 216558499 FOXP1 JASPAR yes 80794915
chr2 216558484 216558505 IRF1 JASPAR yes 22204397
chr2 216558484 216558505 IRF1 JASPAR yes 80794916
chr2 216558485 216558500 FOXP1 JASPAR yes 22204398
chr2 216558485 216558500 FOXP1 JASPAR yes 80794917
chr2 216558487 216558502 FOXP1 JASPAR yes 22204399
chr2 216558487 216558502 FOXP1 JASPAR yes 80794918
chr2 216558488 216558503 STAT2 JASPAR yes 22204400
chr2 216558488 216558503 STAT2 JASPAR yes 80794919
chr2 216558489 216558504 FOXP1 JASPAR yes 22204401
chr2 216558489 216558504 FOXP1 JASPAR yes 80794920
Genes associated with rs562772179[chr2:216558499], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More