EnhancerDB
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  3. rs562786169[chr19:555657]
Enhancers that have rs562786169[chr19:555657]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 552765 561015 enh17834
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Ovary Lung Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Heart
Transcript factors that have rs562786169[chr19:555657]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 555359 557531 TCF7L2 GTRD no Colon (HCT116) 21829379
chr19 555359 557531 TCF7L2 GTRD no Colon (HCT116) 108344737
chr19 555401 557390 ZNF274 GTRD no Liver (HepG2) 21829380
chr19 555401 557390 ZNF274 GTRD no Liver (HepG2) 108344738
chr19 555409 556981 ZNF274 GTRD no Bone Marrow (K562) 21829381
chr19 555409 556981 ZNF274 GTRD no Bone Marrow (K562) 108344739
chr19 555409 557404 ZNF274 GTRD no Bone Marrow (K562) 21829382
chr19 555409 557404 ZNF274 GTRD no Bone Marrow (K562) 108344740
chr19 555410 557461 TCF7L2 GTRD no Colon (HCT116) 21829383
chr19 555410 557461 TCF7L2 GTRD no Colon (HCT116) 108344741
chr19 555417 557372 TCF7L2 GTRD no Colon (HCT116) 21829384
chr19 555417 557372 TCF7L2 GTRD no Colon (HCT116) 108344742
chr19 555425 555908 ZNF274 GTRD no Bone Marrow (K562) 21829385
chr19 555425 557494 ZNF274 GTRD no Bone Marrow (K562) 21829386
chr19 555425 557494 ZNF274 GTRD no Bone Marrow (K562) 108344743
chr19 555429 557357 ZNF274 GTRD no Bone Marrow (K562) 21829387
chr19 555429 557357 ZNF274 GTRD no Bone Marrow (K562) 108344744
chr19 555436 555958 ZNF274 GTRD no Bone Marrow (K562) 21829388
chr19 555439 556732 ZNF274 GTRD no Bone Marrow (K562) 21829389
chr19 555439 556732 ZNF274 GTRD no Bone Marrow (K562) 108344745
chr19 555446 557048 ZNF274 GTRD no Liver (HepG2) 21829390
chr19 555446 557048 ZNF274 GTRD no Liver (HepG2) 108344746
chr19 555451 557458 ZNF274 GTRD no Liver (HepG2) 21829391
chr19 555451 557458 ZNF274 GTRD no Liver (HepG2) 108344747
chr19 555457 557326 ZNF274 GTRD no Liver (HepG2) 21829392
chr19 555457 557326 ZNF274 GTRD no Liver (HepG2) 108344748
chr19 555471 557154 ZNF274 GTRD no Bone Marrow (K562) 21829393
chr19 555471 557154 ZNF274 GTRD no Bone Marrow (K562) 108344749
chr19 555481 556487 ZNF143 GTRD no Epithelial (MCF-7) 21829394
chr19 555481 556487 ZNF143 GTRD no Epithelial (MCF-7) 108344750
chr19 555498 556439 TCF7L2 GTRD no Colon (HCT116) 21829395
chr19 555498 556439 TCF7L2 GTRD no Colon (HCT116) 108344751
chr19 555529 557288 ZNF274 GTRD no Liver (HepG2) 21829396
chr19 555529 557288 ZNF274 GTRD no Liver (HepG2) 108344752
chr19 555533 556863 TCF7L2 GTRD no Colon (HCT116) 21829397
chr19 555533 556863 TCF7L2 GTRD no Colon (HCT116) 108344753
chr19 555536 557068 ZNF274 GTRD no Cervix (HeLa-S3) 21829398
chr19 555536 557068 ZNF274 GTRD no Cervix (HeLa-S3) 108344754
chr19 555561 557570 TCF7L2 GTRD no Colon (HCT116) 21829399
chr19 555561 557570 TCF7L2 GTRD no Colon (HCT116) 108344755
chr19 555579 557379 ZBTB33 GTRD no Lung (A549) 108344756
chr19 555585 557057 ZNF274 GTRD no Liver (HepG2) 21829400
chr19 555585 557057 ZNF274 GTRD no Liver (HepG2) 108344757
chr19 555593 556430 TCF7L2 GTRD no Colon (HCT116) 21829401
chr19 555593 556430 TCF7L2 GTRD no Colon (HCT116) 108344758
chr19 555598 556423 TCF7L2 GTRD no Colon (HCT116) 21829402
chr19 555598 556423 TCF7L2 GTRD no Colon (HCT116) 108344759
chr19 555618 556372 ZNF143 GTRD no Epithelial (MCF-7) 21829403
chr19 555618 556372 ZNF143 GTRD no Epithelial (MCF-7) 108344760
chr19 555618 557009 ZNF274 GTRD no Liver (HepG2) 21829404
chr19 555618 557009 ZNF274 GTRD no Liver (HepG2) 108344761
chr19 555636 557106 ZNF143 GTRD no Epithelial (MCF-7) 21829405
chr19 555636 557106 ZNF143 GTRD no Epithelial (MCF-7) 108344762
chr19 555645 555661 ZNF143 JASPAR yes 111967027
chr19 555647 557104 ZNF274 GTRD no Cervix (HeLa-S3) 21829406
chr19 555647 557104 ZNF274 GTRD no Cervix (HeLa-S3) 108344763
chr19 555652 555663 FOSL2 JASPAR yes 111967028
chr19 555654 555667 SMAD2 JASPAR yes 111967029
chr19 555657 555667 TBR1 JASPAR yes 111967030
Genes associated with rs562786169[chr19:555657], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More