EnhancerDB
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  3. rs56278940[chr19:7474234]
Enhancers that have rs56278940[chr19:7474234]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 7469445 7495915 enh17893
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs56278940[chr19:7474234]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 7474213 7474234 IRF1 JASPAR yes 112324757
chr19 7474214 7474235 IRF1 JASPAR yes 112324759
chr19 7474215 7474236 IRF1 JASPAR yes 112324761
chr19 7474216 7474237 IRF1 JASPAR yes 112324763
chr19 7474218 7474239 IRF1 JASPAR yes 112324766
chr19 7474219 7474234 FOXP1 JASPAR yes 112324767
chr19 7474220 7474241 IRF1 JASPAR yes 112324768
chr19 7474221 7474236 FOXP1 JASPAR yes 112324769
Genes associated with rs56278940[chr19:7474234], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More