EnhancerDB
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  3. rs562797201[chr1:172449154]
Enhancers that have rs562797201[chr1:172449154]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172440585 172461255 enh12372
Skin (Keratinocyte) Prostate (PC-3) Stomach Placenta Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs562797201[chr1:172449154]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172448247 172451908 ZNF143 GTRD no Epithelial (MCF-7) 21349936
chr1 172448454 172451937 ZNF143 GTRD no Epithelial (MCF-7) 21349937
chr1 172448529 172451485 ZNF143 GTRD no Epithelial (MCF-7) 21349938
chr1 172448533 172451531 ZNF143 GTRD no Epithelial (MCF-7) 21349939
chr1 172448542 172451635 ZNF143 GTRD no Epithelial (MCF-7) 21349940
chr1 172448543 172451637 ZNF143 GTRD no Epithelial (MCF-7) 21349941
chr1 172448561 172449810 ZNF143 GTRD no Epithelial (MCF-7) 21349942
chr1 172448566 172449632 ZNF143 GTRD no Epithelial (MCF-7) 21349943
chr1 172448598 172451553 ZNF143 GTRD no Epithelial (MCF-7) 21349944
chr1 172448599 172449879 ZNF143 GTRD no Epithelial (MCF-7) 21349945
chr1 172448602 172449767 ZNF143 GTRD no Epithelial (MCF-7) 21349946
chr1 172448607 172451866 ZNF143 GTRD no Epithelial (MCF-7) 21349947
chr1 172448608 172449837 ZNF143 GTRD no Epithelial (MCF-7) 21349948
chr1 172448637 172449908 ZNF143 GTRD no Epithelial (MCF-7) 21349949
chr1 172448659 172451322 ZNF143 GTRD no Epithelial (MCF-7) 21349950
chr1 172448666 172451876 ZNF143 GTRD no Epithelial (MCF-7) 21349951
chr1 172448690 172450426 ZNF143 GTRD no Epithelial (MCF-7) 21349952
chr1 172448698 172449685 ZNF143 GTRD no Epithelial (MCF-7) 21349953
chr1 172448702 172450350 ZNF143 GTRD no Epithelial (MCF-7) 21349954
chr1 172448703 172449675 ZNF143 GTRD no Epithelial (MCF-7) 21349955
chr1 172448727 172450883 ZNF143 GTRD no Epithelial (MCF-7) 21349956
chr1 172448740 172449632 ZNF143 GTRD no Epithelial (MCF-7) 21349957
chr1 172448744 172449694 ZNF143 GTRD no Epithelial (MCF-7) 21349958
chr1 172448764 172449500 ZNF143 GTRD no Epithelial (MCF-7) 21349959
chr1 172448766 172449650 ZNF143 GTRD no Epithelial (MCF-7) 21349960
chr1 172448770 172450900 ZNF143 GTRD no Epithelial (MCF-7) 21349961
chr1 172448777 172449486 ZNF143 GTRD no Epithelial (MCF-7) 21349962
chr1 172448788 172449579 ZNF143 GTRD no Epithelial (MCF-7) 21349963
chr1 172448806 172449473 ZNF143 GTRD no Epithelial (MCF-7) 21349964
chr1 172448816 172449507 ZNF143 GTRD no Epithelial (MCF-7) 21349965
chr1 172448817 172450393 ZNF143 GTRD no Epithelial (MCF-7) 21349966
chr1 172448858 172451347 ZNF143 GTRD no Epithelial (MCF-7) 21349967
chr1 172448877 172449678 ZNF143 GTRD no Epithelial (MCF-7) 21349968
chr1 172448881 172449217 ZNF143 GTRD no Epithelial (MCF-7) 21349969
chr1 172448882 172450909 ZNF143 GTRD no Epithelial (MCF-7) 21349970
chr1 172448884 172449729 ZNF143 GTRD no Epithelial (MCF-7) 21349971
chr1 172448885 172451035 ZNF143 GTRD no Epithelial (MCF-7) 21349972
chr1 172448912 172449535 ZNF143 GTRD no Epithelial (MCF-7) 21349973
chr1 172448979 172449584 ZNF143 GTRD no Epithelial (MCF-7) 21349974
chr1 172449016 172449428 ZNF143 GTRD no Epithelial (MCF-7) 21349975
chr1 172449086 172450905 ZNF143 GTRD no Epithelial (MCF-7) 21349976
chr1 172449137 172449157 RREB1 JASPAR yes 33131381
chr1 172449138 172449159 IRF1 JASPAR yes 33131383
chr1 172449140 172449160 RREB1 JASPAR yes 33131384
chr1 172449142 172449157 STAT2 JASPAR yes 33131386
chr1 172449143 172449155 IRF1 JASPAR yes 33131387
chr1 172449143 172449158 FOXP1 JASPAR yes 33131388
chr1 172449144 172449165 IRF1 JASPAR yes 33131389
chr1 172449145 172449165 RREB1 JASPAR yes 33131390
Genes associated with rs562797201[chr1:172449154], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More