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- rs56280001[chr17:8055524]
Enhancers that have rs56280001[chr17:8055524]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
8033385 |
8057875 |
enh4236 |
|
|
Transcript factors that have rs56280001[chr17:8055524]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
8054208
|
8060681
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108236379
|
|
|
chr17
|
8054208
|
8060681
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108236380
|
|
|
chr17
|
8055247
|
8057749
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108236381
|
|
|
chr17
|
8055247
|
8057749
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108236382
|
|
|
chr17
|
8055363
|
8058331
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108236383
|
|
|
chr17
|
8055363
|
8058331
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108236384
|
|
|
chr17
|
8055433
|
8058466
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108236385
|
|
|
chr17
|
8055433
|
8058466
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108236386
|
|
|
chr17
|
8055514
|
8055524
|
SP1
|
JASPAR
|
yes
|
|
52969658
|
|
|
chr17
|
8055515
|
8055525
|
SP1
|
JASPAR
|
yes
|
|
52969659
|
|
|
chr17
|
8055515
|
8055536
|
ZNF263
|
JASPAR
|
yes
|
|
52969660
|
|
Genes associated with rs56280001[chr17:8055524], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr17
|
8213559
|
8225829
|
+
|
ARHGEF15
|
ENSG00000198844.6
|
8213559
|
158035
|
Esophagus
|
0.273716
|
15415
|
|