EnhancerDB
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  3. rs562808228[chr12:50607221]
Enhancers that have rs562808228[chr12:50607221]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50600876 50615015 enh2345
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Lung (A549) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Stomach Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs562808228[chr12:50607221]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50607209 50607223 TLX1 JASPAR yes 120819067
chr12 50607211 50607222 USF2 JASPAR yes 120819068
chr12 50607211 50607223 HES5 JASPAR yes 120819069
chr12 50607211 50607223 HES7 JASPAR yes 120819070
chr12 50607212 50607222 TFEB JASPAR yes 120819071
Genes associated with rs562808228[chr12:50607221], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More