EnhancerDB
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  3. rs562825837[chr1:29298348]
Enhancers that have rs562825837[chr1:29298348]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 29289305 29304099 enh26594
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Esophagus Astrocyte Liver Bone (Osteoblast) Muscle (A673) Colon (HCT116) Adrenal Lung (PC-9) Muscle (Myoblast) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs562825837[chr1:29298348]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 29298334 29298355 IRF1 JASPAR yes 27795338
chr1 29298336 29298351 IRF9 JASPAR yes 27795339
chr1 29298337 29298351 IRF7 JASPAR yes 27795341
chr1 29298337 29298351 IRF8 JASPAR yes 27795342
chr1 29298338 29298352 STAT1 JASPAR yes 27795343
chr1 29298338 29298353 STAT2 JASPAR yes 27795344
chr1 29298339 29298351 IRF1 JASPAR yes 27795345
chr1 29298346 29298359 ELF1 JASPAR yes 27795346
chr1 29298347 29298359 EHF JASPAR yes 27795347
chr1 29298347 29298360 ELF3 JASPAR yes 27795348
chr1 29298348 29298359 ELF5 JASPAR yes 27795349
Genes associated with rs562825837[chr1:29298348], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More