EnhancerDB
  1. Home
  2. SNP
  3. rs562860273[chr16:374204]
Enhancers that have rs562860273[chr16:374204]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 364825 394775 enh16487
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs562860273[chr16:374204]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 370916 375680 ZNF143 GTRD no Epithelial (MCF-7) 21683784
chr16 370916 375680 ZNF143 GTRD no Epithelial (MCF-7) 108170123
chr16 370916 375680 ZNF143 GTRD no Epithelial (MCF-7) 108170124
chr16 373533 375689 ZNF143 GTRD no Epithelial (MCF-7) 21683785
chr16 373533 375689 ZNF143 GTRD no Epithelial (MCF-7) 108170125
chr16 373533 375689 ZNF143 GTRD no Epithelial (MCF-7) 108170126
chr16 373783 375527 ZNF143 GTRD no Epithelial (MCF-7) 21683786
chr16 373783 375527 ZNF143 GTRD no Epithelial (MCF-7) 108170127
chr16 373783 375527 ZNF143 GTRD no Epithelial (MCF-7) 108170128
chr16 373921 375320 ZNF143 GTRD no Epithelial (MCF-7) 21683787
chr16 373921 375320 ZNF143 GTRD no Epithelial (MCF-7) 108170129
chr16 373921 375320 ZNF143 GTRD no Epithelial (MCF-7) 108170130
chr16 373974 374571 ZNF143 GTRD no Epithelial (MCF-7) 21683788
chr16 373974 374571 ZNF143 GTRD no Epithelial (MCF-7) 108170131
chr16 373987 374670 ZBTB33 GTRD no Lung (A549) 108170132
chr16 374021 374394 TCF7L2 GTRD no Colon (HCT116) 21683789
chr16 374021 374394 TCF7L2 GTRD no Colon (HCT116) 108170133
chr16 374028 374798 ZNF274 GTRD no Bone Marrow (K562) 21683790
chr16 374028 374798 ZNF274 GTRD no Bone Marrow (K562) 108170134
chr16 374060 374459 ZNF274 GTRD no Blood (GM12878) 108170135
chr16 374180 374558 ZNF274 GTRD no Bone Marrow (K562) 21683791
chr16 374180 374558 ZNF274 GTRD no Bone Marrow (K562) 108170136
chr16 374180 374836 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21683792
chr16 374180 374836 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108170137
chr16 374183 374550 ZNF274 GTRD no Cervix (HeLa-S3) 21683793
chr16 374183 374550 ZNF274 GTRD no Cervix (HeLa-S3) 108170138
chr16 374203 374213 GABPA JASPAR yes 9104496
Genes associated with rs562860273[chr16:374204], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More