EnhancerDB
  1. Home
  2. SNP
  3. rs562865617[chr3:128105340]
Enhancers that have rs562865617[chr3:128105340]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 128077025 128109405 enh7522
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Ovary Liver Brain (SK-N-SH) Bone (Osteoblast) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Uterus Heart
Transcript factors that have rs562865617[chr3:128105340]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 128105337 128105345 MEIS3 JASPAR yes 5594812
chr3 128105338 128105350 PKNOX1 JASPAR yes 5594813
chr3 128105338 128105350 PKNOX2 JASPAR yes 5594814
chr3 128105338 128105350 TGIF1 JASPAR yes 5594815
chr3 128105338 128105350 TGIF2 JASPAR yes 5594816
chr3 128105339 128105350 USF2 JASPAR yes 5594817
Genes associated with rs562865617[chr3:128105340], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More