EnhancerDB
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  3. rs562890767[chr17:70393604]
Enhancers that have rs562890767[chr17:70393604]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs562890767[chr17:70393604]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70393173 70393789 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784505
chr17 70393292 70393836 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784508
chr17 70393584 70393605 IRF1 JASPAR yes 55782927
chr17 70393585 70393606 IRF1 JASPAR yes 55782930
chr17 70393591 70393606 FOXP1 JASPAR yes 55782934
chr17 70393592 70393604 FOXC2 JASPAR yes 55782936
chr17 70393593 70393604 FOXC1 JASPAR yes 55782937
Genes associated with rs562890767[chr17:70393604], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More