EnhancerDB
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  3. rs562891586[chr2:37798348]
Enhancers that have rs562891586[chr2:37798348]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 37774853 37803415 enh5416
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Blood (GM12878) Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Uterus
chr2 37797953 37798358 vista31009
VISTA
Transcript factors that have rs562891586[chr2:37798348]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 37797897 37798477 ATF2 UCSC Txn Factor no Conserved 108431810
chr2 37797898 37798515 NFIC UCSC Txn Factor no Conserved 108431811
chr2 37797934 37798366 RUNX3 UCSC Txn Factor no Conserved 108431812
chr2 37798344 37798354 NFKB1 JASPAR yes 22032935
chr2 37798344 37798354 NFKB1 JASPAR yes 73062653
chr2 37798344 37798355 NFKB1 JASPAR yes 22032936
chr2 37798344 37798355 NFKB1 JASPAR yes 73062654
chr2 37798348 37798352 NFE TRANSFAC yes 22032937
chr2 37798348 37798352 NFE TRANSFAC yes 73062655
Genes associated with rs562891586[chr2:37798348], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More