EnhancerDB
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  3. rs562983827[chr1:40445237]
Enhancers that have rs562983827[chr1:40445237]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40433665 40464395 enh265
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (GM12878) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs562983827[chr1:40445237]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40445234 40445249 FOXP1 JASPAR yes 28304146
chr1 40445235 40445250 FOXP1 JASPAR yes 28304147
chr1 40445236 40445251 FOXP1 JASPAR yes 28304148
chr1 40445237 40445252 FOXP1 JASPAR yes 28304149
chr1 40445237 40445258 IRF1 JASPAR yes 28304150
Genes associated with rs562983827[chr1:40445237], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More