EnhancerDB
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  3. rs563105342[chr19:2507629]
Enhancers that have rs563105342[chr19:2507629]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2481141 2509475 enh4958
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs563105342[chr19:2507629]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2506701 2507810 ZBTB33 GTRD no Lung (A549) 108360760
chr19 2506728 2507825 ZNF274 GTRD no Cervix (HeLa-S3) 21835839
chr19 2506728 2507825 ZNF274 GTRD no Cervix (HeLa-S3) 108360761
chr19 2506743 2507647 ZNF274 GTRD no Cervix (HeLa-S3) 21835841
chr19 2506743 2507647 ZNF274 GTRD no Cervix (HeLa-S3) 108360763
chr19 2506779 2507719 ZNF274 GTRD no Liver (HepG2) 21835843
chr19 2506779 2507719 ZNF274 GTRD no Liver (HepG2) 108360765
chr19 2506791 2507732 ZNF274 GTRD no Bone Marrow (K562) 21835846
chr19 2506791 2507732 ZNF274 GTRD no Bone Marrow (K562) 108360768
chr19 2506793 2507759 ZBTB33 GTRD no Lung (A549) 108360769
chr19 2506820 2507715 ZNF274 GTRD no Liver (HepG2) 21835847
chr19 2506820 2507715 ZNF274 GTRD no Liver (HepG2) 108360770
chr19 2506843 2507762 ZNF274 GTRD no Cervix (HeLa-S3) 21835851
chr19 2506843 2507762 ZNF274 GTRD no Cervix (HeLa-S3) 108360775
chr19 2506859 2507672 ZNF274 GTRD no Liver (HepG2) 21835853
chr19 2506859 2507672 ZNF274 GTRD no Liver (HepG2) 108360778
chr19 2506895 2507714 ZNF274 GTRD no Cervix (HeLa-S3) 21835859
chr19 2506895 2507714 ZNF274 GTRD no Cervix (HeLa-S3) 108360786
chr19 2506969 2507669 ZNF274 GTRD no Liver (HepG2) 21835870
chr19 2506969 2507669 ZNF274 GTRD no Liver (HepG2) 108360803
chr19 2506971 2507636 TEF1 GTRD no Bone (Osteoblast) 21835873
chr19 2506971 2507636 TEF1 GTRD no Bone (Osteoblast) 108360806
chr19 2506978 2507640 ZNF274 GTRD no Bone Marrow (K562) 21835875
chr19 2506978 2507640 ZNF274 GTRD no Bone Marrow (K562) 108360810
chr19 2506989 2507770 ZNF274 GTRD no Cervix (HeLa-S3) 21835879
chr19 2506989 2507770 ZNF274 GTRD no Cervix (HeLa-S3) 108360815
chr19 2507014 2507695 ZNF274 GTRD no Cervix (HeLa-S3) 21835895
chr19 2507014 2507695 ZNF274 GTRD no Cervix (HeLa-S3) 108360835
chr19 2507156 2508111 TCF7L2 GTRD no Colon (HCT116) 108360914
chr19 2507193 2508537 TCF7L2 GTRD no Colon (HCT116) 108360930
chr19 2507305 2507657 TCF7L2 GTRD no Colon (HCT116) 108360943
chr19 2507337 2507874 TCF7L2 GTRD no Colon (HCT116) 108360945
chr19 2507377 2508339 TCF7L2 GTRD no Colon (HCT116) 108360946
chr19 2507610 2507631 IRF1 JASPAR yes 112068170
chr19 2507612 2507633 IRF1 JASPAR yes 112068171
chr19 2507612 2507633 ZNF263 JASPAR yes 112068172
chr19 2507614 2507629 PRDM1 JASPAR yes 112068173
chr19 2507614 2507629 STAT2 JASPAR yes 112068174
chr19 2507615 2507629 STAT1 JASPAR yes 112068175
chr19 2507616 2507637 IRF1 JASPAR yes 112068176
chr19 2507619 2507640 ZNF263 JASPAR yes 112068177
chr19 2507621 2507642 ZNF263 JASPAR yes 112068178
chr19 2507626 2507647 ZNF263 JASPAR yes 112068179
chr19 2507627 2507648 ZNF263 JASPAR yes 112068180
chr19 2507628 2507649 ZNF263 JASPAR yes 112068181
chr19 2507629 2507650 ZNF263 JASPAR yes 112068182
Genes associated with rs563105342[chr19:2507629], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More