EnhancerDB
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  3. rs56315233[chr17:46571866]
Enhancers that have rs56315233[chr17:46571866]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 46553725 46585590 enh4456
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs56315233[chr17:46571866]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 46571415 46572011 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21767784
chr17 46571716 46572172 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21767785
chr17 46571861 46571876 FOXA1 JASPAR yes 54589902
chr17 46571863 46571875 FOXC2 JASPAR yes 54589903
chr17 46571864 46571875 FOXB1 JASPAR yes 54589904
chr17 46571864 46571875 FOXC1 JASPAR yes 54589905
Genes associated with rs56315233[chr17:46571866], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More