EnhancerDB
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  3. rs563177189[chr12:106682022]
Enhancers that have rs563177189[chr12:106682022]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 106671985 106687355 enh29961
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Lung (PC-9) Pancreas (Panc1) Heart
Transcript factors that have rs563177189[chr12:106682022]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 106681860 106682364 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108056034
chr12 106682016 106682031 SOX21 JASPAR yes 123505768
chr12 106682017 106682037 RREB1 JASPAR yes 123505769
chr12 106682022 106682027 SP1 TRANSFAC yes 123505770
chr12 106682022 106682042 RREB1 JASPAR yes 123505771
Genes associated with rs563177189[chr12:106682022], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More