EnhancerDB
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  3. rs563178818[chr17:38509006]
Enhancers that have rs563178818[chr17:38509006]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38486105 38510075 enh60669
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Colon (HCT116) Lung (PC-9) Uterus Blood (T-cell) Stomach
Transcript factors that have rs563178818[chr17:38509006]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38507281 38510119 ZBTB33 GTRD no Lung (A549) 108254747
chr17 38508331 38510508 TCF7L2 GTRD no Colon (HCT116) 21753780
chr17 38508331 38510508 TCF7L2 GTRD no Colon (HCT116) 108254748
chr17 38508450 38510478 TCF7L2 GTRD no Colon (HCT116) 21753781
chr17 38508450 38510478 TCF7L2 GTRD no Colon (HCT116) 108254749
chr17 38508534 38510237 TCF7L2 GTRD no Colon (HCT116) 21753782
chr17 38508534 38510237 TCF7L2 GTRD no Colon (HCT116) 108254750
chr17 38508600 38509879 ZBTB33 GTRD no Lung (A549) 108254751
chr17 38508613 38509843 ZBTB33 GTRD no Lung (A549) 108254752
chr17 38508693 38510226 ZNF143 GTRD no Epithelial (MCF-7) 108254753
chr17 38508718 38512236 ZBTB33 GTRD no Brain (SK-N-SH) 21753783
chr17 38508718 38512236 ZBTB33 GTRD no Brain (SK-N-SH) 108254754
chr17 38508790 38510191 ZBTB33 GTRD no Lung (A549) 108254755
chr17 38508810 38510071 ZBTB33 GTRD no Lung (A549) 108254756
chr17 38508870 38509931 ZBTB33 GTRD no Lung (A549) 108254757
chr17 38508878 38510037 TCF7L2 GTRD no Colon (HCT116) 21753784
chr17 38508878 38510037 TCF7L2 GTRD no Colon (HCT116) 108254758
chr17 38508897 38510291 ZNF143 GTRD no Epithelial (MCF-7) 108254759
chr17 38508937 38510160 ZBTB33 GTRD no Lung (A549) 108254760
chr17 38508946 38509880 ZBTB33 GTRD no Lung (A549) 108254761
chr17 38508947 38510656 TCF7L2 GTRD no Colon (HCT116) 21753785
chr17 38508947 38510656 TCF7L2 GTRD no Colon (HCT116) 108254762
chr17 38508970 38510144 ZNF274 GTRD no Bone Marrow (K562) 108254763
chr17 38508972 38509630 TCF7L2 GTRD no Colon (HCT116) 21753786
chr17 38508972 38509630 TCF7L2 GTRD no Colon (HCT116) 108254764
chr17 38508979 38512968 ZBTB33 GTRD no Brain (SK-N-SH) 21753787
chr17 38508979 38512968 ZBTB33 GTRD no Brain (SK-N-SH) 108254765
chr17 38508990 38509986 ZNF274 GTRD no Blood (GM12878) 21753788
chr17 38508990 38509986 ZNF274 GTRD no Blood (GM12878) 108254766
chr17 38508998 38511328 ZNF274 GTRD no Liver (HepG2) 21753789
chr17 38508998 38511328 ZNF274 GTRD no Liver (HepG2) 108254767
chr17 38508999 38509691 TCF7L2 GTRD no Colon (HCT116) 21753790
chr17 38508999 38509691 TCF7L2 GTRD no Colon (HCT116) 108254768
chr17 38509000 38509564 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21753791
chr17 38509000 38509564 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108254769
chr17 38509004 38509010 YY1 JASPAR yes 54209399
chr17 38509005 38509017 PBX1 JASPAR yes 54209400
Genes associated with rs563178818[chr17:38509006], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More