EnhancerDB
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  3. rs563222457[chr1:230205018]
Enhancers that have rs563222457[chr1:230205018]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230203175 230225395 enh12769
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs563222457[chr1:230205018]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230204372 230206800 ZNF274 GTRD no Bone Marrow (K562) 107878308
chr1 230204435 230206723 ZNF274 GTRD no Bone Marrow (K562) 107878309
chr1 230204475 230205079 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21391237
chr1 230204475 230205079 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107878310
Genes associated with rs563222457[chr1:230205018], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More