EnhancerDB
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  3. rs563298393[chr6:11650690]
Enhancers that have rs563298393[chr6:11650690]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11648565 11658931 enh8952
Prostate (PC-3) Cervix (HeLa-S3) Ovary Esophagus Astrocyte Lung Blood (GM12878) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
chr6 11650418 11650889 vista50850
VISTA
Transcript factors that have rs563298393[chr6:11650690]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11650509 11650813 ESR1 UCSC Txn Factor no Conserved 108538439
chr6 11650514 11650710 FOS UCSC Txn Factor no Conserved 108538440
chr6 11650523 11650772 JUN UCSC Txn Factor no Conserved 108538441
chr6 11650567 11650851 GATA2 UCSC Txn Factor no Conserved 108538442
chr6 11650583 11650759 TEAD4 UCSC Txn Factor no Conserved 108538443
chr6 11650688 11650691 MYB TRANSFAC yes 70310526
chr6 11650688 11650691 MYB TRANSFAC yes 99905241
chr6 11650688 11650697 SOX9 JASPAR yes 70310527
chr6 11650688 11650697 SOX9 JASPAR yes 99905242
chr6 11650688 11650704 SOX4 JASPAR yes 70310528
chr6 11650688 11650704 SOX4 JASPAR yes 99905243
Genes associated with rs563298393[chr6:11650690], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More