EnhancerDB
  1. Home
  2. SNP
  3. rs563309716[chr5:149704487]
Enhancers that have rs563309716[chr5:149704487]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 149691605 149705895 enh22714
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Adrenal Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs563309716[chr5:149704487]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 149704480 149704494 SPIC JASPAR yes 66874641
chr5 149704482 149704488 SOX10 JASPAR yes 66874642
chr5 149704484 149704498 TLX1 JASPAR yes 66874643
Genes associated with rs563309716[chr5:149704487], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More