EnhancerDB
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  3. rs563349934[chr1:228975242]
Enhancers that have rs563349934[chr1:228975242]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228960005 228980255 enh12752
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Cervix (HeLa-S3) Stomach Placenta Colon (HCT116) Breast Thyroid Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs563349934[chr1:228975242]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228974981 228975271 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388926
chr1 228974990 228975270 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388927
chr1 228975052 228976030 AR GTRD no Prostate (PC-3) 21388929
chr1 228975234 228975244 SREBF1 JASPAR yes 35934441
chr1 228975234 228975244 SREBF2 JASPAR yes 35934442
chr1 228975237 228975254 RXRA JASPAR yes 35934443
chr1 228975242 228975249 SPIB JASPAR yes 35934444
chr1 228975242 228975253 FLI1 JASPAR yes 35934445
Genes associated with rs563349934[chr1:228975242], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More