EnhancerDB
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  3. rs563354604[chr16:1765527]
Enhancers that have rs563354604[chr16:1765527]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1759265 1774552 enh3842
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs563354604[chr16:1765527]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1765514 1765527 SMAD2 JASPAR yes 9157798
chr16 1765527 1765541 TCF7L2 JASPAR yes 9157799
chr16 1765527 1765542 LEF1 JASPAR yes 9157800
Genes associated with rs563354604[chr16:1765527], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More