EnhancerDB
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  3. rs563403676[chr16:85438568]
Enhancers that have rs563403676[chr16:85438568]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85422125 85439595 enh4173
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs563403676[chr16:85438568]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85434673 85441574 ZNF143 GTRD no Epithelial (MCF-7) 21725074
chr16 85434683 85438585 TCF7L2 GTRD no Colon (HCT116) 21725075
chr16 85435536 85441658 ZNF143 GTRD no Epithelial (MCF-7) 21725077
chr16 85435570 85443981 ZNF143 GTRD no Epithelial (MCF-7) 21725078
chr16 85435585 85438727 ZNF143 GTRD no Epithelial (MCF-7) 21725079
chr16 85435996 85440319 ZNF143 GTRD no Epithelial (MCF-7) 21725091
chr16 85437412 85439237 ZNF274 GTRD no Bone Marrow (K562) 21725222
chr16 85437706 85438586 TCF7L2 GTRD no Colon (HCT116) 21725223
chr16 85437836 85439188 ZNF274 GTRD no Bone Marrow (K562) 21725224
chr16 85437957 85439625 TCF7L2 GTRD no Colon (HCT116) 21725225
chr16 85437961 85439882 ZNF143 GTRD no Epithelial (MCF-7) 21725226
chr16 85438039 85438639 TCF7L2 GTRD no Colon (HCT116) 21725227
chr16 85438040 85439287 TCF7L2 GTRD no Colon (HCT116) 21725228
chr16 85438319 85439485 ZNF143 GTRD no Epithelial (MCF-7) 21725230
chr16 85438452 85439422 ZNF143 GTRD no Epithelial (MCF-7) 21725231
chr16 85438568 85438573 GATA2 JASPAR yes 12057898
Genes associated with rs563403676[chr16:85438568], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More