EnhancerDB
  1. Home
  2. SNP
  3. rs563410829[chr6:110841917]
Enhancers that have rs563410829[chr6:110841917]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 110836885 110871534 enh23506
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs563410829[chr6:110841917]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 110841903 110841918 RUNX2 JASPAR yes 104293124
chr6 110841910 110841920 SP1 JASPAR yes 104293125
chr6 110841917 110841922 SP1 TRANSFAC yes 104293126
Genes associated with rs563410829[chr6:110841917], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More