EnhancerDB
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  3. rs563469942[chr17:80263117]
Enhancers that have rs563469942[chr17:80263117]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80234785 80270055 enh4646
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs563469942[chr17:80263117]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80260740 80265154 ZNF274 GTRD no Liver (HepG2) 21799679
chr17 80260780 80266364 ZNF274 GTRD no Blood (GM12878) 21799702
chr17 80260782 80264203 ZNF274 GTRD no Liver (HepG2) 21799708
chr17 80260795 80266377 ZNF274 GTRD no Blood (GM12878) 21799722
chr17 80260796 80266374 ZNF274 GTRD no Blood (GM12878) 21799725
chr17 80260829 80264316 ZNF274 GTRD no Cervix (HeLa-S3) 21799763
chr17 80260853 80266375 ZNF274 GTRD no Blood (GM12878) 21799772
chr17 80261297 80263190 ZNF274 GTRD no Bone Marrow (K562) 21799825
chr17 80261738 80263140 ZNF274 GTRD no Bone Marrow (K562) 21799851
chr17 80261811 80263300 ZNF274 GTRD no Bone Marrow (K562) 21799852
chr17 80262084 80264219 ZNF143 GTRD no Epithelial (MCF-7) 21799856
chr17 80262112 80263930 ZNF274 GTRD no Bone Marrow (K562) 21799857
chr17 80262199 80263954 ZNF274 GTRD no Bone Marrow (K562) 21799861
chr17 80262339 80263482 TCF7L2 GTRD no Colon (HCT116) 21799875
chr17 80262410 80266053 ZNF274 GTRD no Blood (GM12878) 21799877
chr17 80262427 80265256 TCF7L2 GTRD no Colon (HCT116) 21799879
chr17 80262471 80265030 TCF7L2 GTRD no Colon (HCT116) 21799881
chr17 80262518 80265217 TCF7L2 GTRD no Colon (HCT116) 21799883
chr17 80262610 80263647 TCF7L2 GTRD no Colon (HCT116) 21799884
chr17 80262629 80263550 ZNF274 GTRD no Bone Marrow (K562) 21799885
chr17 80262639 80263935 ZNF143 GTRD no Epithelial (MCF-7) 21799886
chr17 80262662 80264405 ZNF274 GTRD no Liver (HepG2) 21799887
chr17 80262668 80263164 ZNF274 GTRD no Bone Marrow (K562) 21799888
chr17 80262670 80264160 ZNF274 GTRD no Liver (HepG2) 21799889
chr17 80262673 80263458 TCF7L2 GTRD no Colon (HCT116) 21799890
chr17 80262673 80263523 ZNF143 GTRD no Epithelial (MCF-7) 21799891
chr17 80262706 80264131 ZNF143 GTRD no Epithelial (MCF-7) 21799892
chr17 80262709 80263928 ZNF143 GTRD no Epithelial (MCF-7) 21799893
chr17 80262743 80264104 ZNF274 GTRD no Liver (HepG2) 21799894
chr17 80262746 80264045 ZNF274 GTRD no Blood (GM12878) 21799895
chr17 80262891 80264143 ZNF274 GTRD no Liver (HepG2) 21799897
chr17 80262917 80264217 ZNF274 GTRD no Liver (HepG2) 21799898
chr17 80262967 80263676 ZNF274 GTRD no Bone Marrow (K562) 21799899
chr17 80262976 80263923 ZNF274 GTRD no Bone Marrow (K562) 21799900
chr17 80262991 80263889 ZNF274 GTRD no Liver (HepG2) 21799901
chr17 80263006 80265045 ZNF274 GTRD no Liver (HepG2) 21799902
chr17 80263013 80263421 ZNF274 GTRD no Blood (GM12878) 21799903
chr17 80263022 80263398 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21799904
chr17 80263027 80266271 ZNF274 GTRD no Blood (GM12878) 21799905
chr17 80263056 80263867 ZNF274 GTRD no Liver (HepG2) 21799906
chr17 80263062 80265202 ZNF274 GTRD no Blood (GM12878) 21799907
chr17 80263063 80263293 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21799908
chr17 80263067 80263291 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21799909
chr17 80263070 80263884 ZNF274 GTRD no Liver (HepG2) 21799910
chr17 80263071 80263908 ZNF274 GTRD no Liver (HepG2) 21799911
chr17 80263092 80263815 ZNF274 GTRD no Bone Marrow (K562) 21799912
chr17 80263102 80264137 ZNF274 GTRD no Blood (GM12878) 21799913
chr17 80263104 80263992 ZNF274 GTRD no Blood (GM12878) 21799914
chr17 80263106 80263118 NHLH1 JASPAR yes 56360876
chr17 80263113 80264441 ZNF274 GTRD no Bone Marrow (K562) 21799915
chr17 80263117 80264003 ZNF274 GTRD no Blood (GM12878) 21799916
Genes associated with rs563469942[chr17:80263117], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More