EnhancerDB
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  3. rs563485139[chr19:12905663]
Enhancers that have rs563485139[chr19:12905663]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 12880762 12907555 enh5013
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Blood (Karpas-422) Muscle (Myoblast) Uterus Blood (T-cell)
Transcript factors that have rs563485139[chr19:12905663]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 12899245 12906365 POLR2A UCSC Txn Factor no Conserved 108386458
chr19 12899245 12906365 POLR2A UCSC Txn Factor no Conserved 108386459
chr19 12905652 12905673 IRF1 JASPAR yes 112495048
chr19 12905654 12905669 PRDM1 JASPAR yes 112495049
chr19 12905654 12905669 STAT2 JASPAR yes 112495050
chr19 12905654 12905675 IRF1 JASPAR yes 112495051
chr19 12905657 12905672 FOXP1 JASPAR yes 112495052
chr19 12905658 12905673 FOXP1 JASPAR yes 112495053
chr19 12905659 12905674 FOXP1 JASPAR yes 112495054
chr19 12905660 12905675 FOXP1 JASPAR yes 112495055
chr19 12905661 12905676 FOXP1 JASPAR yes 112495056
chr19 12905662 12905677 FOXP1 JASPAR yes 112495057
Genes associated with rs563485139[chr19:12905663], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More