EnhancerDB
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  3. rs563549565[chr1:22598817]
Enhancers that have rs563549565[chr1:22598817]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22573285 22604835 enh11598
Prostate (PC-3) Large Intestine Prostate (RWPE1) Esophagus Ovary Stomach Placenta Breast Thyroid Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs563549565[chr1:22598817]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22598625 22599152 TCF7L2 GTRD no Colon (HCT116) 107802391
chr1 22598801 22598819 MAFF JASPAR yes 27357790
chr1 22598802 22598817 MAFK JASPAR yes 27357791
chr1 22598806 22598817 NRL JASPAR yes 27357792
chr1 22598810 22598825 FOXP1 JASPAR yes 27357793
chr1 22598810 22598831 IRF1 JASPAR yes 27357794
chr1 22598811 22598826 FOXP1 JASPAR yes 27357795
chr1 22598813 22598828 FOXP1 JASPAR yes 27357796
chr1 22598814 22598829 STAT2 JASPAR yes 27357797
chr1 22598815 22598830 FOXP1 JASPAR yes 27357798
chr1 22598815 22598836 IRF1 JASPAR yes 27357799
chr1 22598817 22598829 FOXC2 JASPAR yes 27357800
chr1 22598817 22598837 RREB1 JASPAR yes 27357801
Genes associated with rs563549565[chr1:22598817], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More