EnhancerDB
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  3. rs563556816[chr1:48964222]
Enhancers that have rs563556816[chr1:48964222]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 48956205 48969115 enh11841
Liver (HepG2) Brain (SK-N-MC) Large Intestine Astrocyte Bone (Osteoblast) Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs563556816[chr1:48964222]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 48964210 48964231 IRF1 JASPAR yes 28743269
chr1 48964212 48964227 STAT2 JASPAR yes 28743270
chr1 48964213 48964227 SPI1 JASPAR yes 28743271
chr1 48964213 48964227 STAT1 JASPAR yes 28743272
chr1 48964216 48964223 SPIB JASPAR yes 28743273
chr1 48964217 48964238 ZNF263 JASPAR yes 28743274
chr1 48964221 48964232 E2F4 JASPAR yes 28743275
chr1 48964221 48964232 E2F6 JASPAR yes 28743276
chr1 48964222 48964229 E2F1 TRANSFAC yes 28743277
chr1 48964222 48964230 E2F1 JASPAR yes 28743278
chr1 48964222 48964233 E2F1 JASPAR yes 28743279
Genes associated with rs563556816[chr1:48964222], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More