EnhancerDB
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  3. rs563568406[chr17:39700822]
Enhancers that have rs563568406[chr17:39700822]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39688905 39708275 enh17150
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs563568406[chr17:39700822]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39698423 39704417 ZNF274 GTRD no Liver (HepG2) 108258721
chr17 39698423 39704417 ZNF274 GTRD no Liver (HepG2) 108258722
chr17 39698872 39704440 ZBTB33 GTRD no Lung (A549) 21757673
chr17 39698872 39704440 ZBTB33 GTRD no Lung (A549) 108258723
chr17 39698872 39704440 ZBTB33 GTRD no Lung (A549) 108258724
chr17 39698902 39704314 ZBTB33 GTRD no Lung (A549) 21757674
chr17 39698902 39704314 ZBTB33 GTRD no Lung (A549) 108258725
chr17 39698902 39704314 ZBTB33 GTRD no Lung (A549) 108258726
chr17 39698974 39700981 ZBTB33 GTRD no Lung (A549) 21757675
chr17 39699358 39704306 ZBTB33 GTRD no Lung (A549) 21757678
chr17 39699358 39704306 ZBTB33 GTRD no Lung (A549) 108258727
chr17 39699358 39704306 ZBTB33 GTRD no Lung (A549) 108258728
chr17 39699359 39700881 ZBTB33 GTRD no Lung (A549) 21757679
chr17 39699405 39702125 ZNF274 GTRD no Cervix (HeLa-S3) 21757683
chr17 39699443 39700851 ZBTB33 GTRD no Lung (A549) 21757685
chr17 39699469 39701253 TCF7L2 GTRD no Colon (HCT116) 21757686
chr17 39699474 39704149 ZNF274 GTRD no Liver (HepG2) 108258729
chr17 39699474 39704149 ZNF274 GTRD no Liver (HepG2) 108258730
chr17 39699582 39701102 TCF7L2 GTRD no Colon (HCT116) 21757691
chr17 39699607 39701117 TCF7L2 GTRD no Colon (HCT116) 21757694
chr17 39699621 39704438 ZNF274 GTRD no Liver (HepG2) 108258731
chr17 39699621 39704438 ZNF274 GTRD no Liver (HepG2) 108258732
chr17 39699689 39701166 TCF7L2 GTRD no Colon (HCT116) 21757700
chr17 39699691 39701139 TCF7L2 GTRD no Colon (HCT116) 21757702
chr17 39699715 39700862 ZBTB33 GTRD no Lung (A549) 21757707
chr17 39699729 39701226 TCF7L2 GTRD no Colon (HCT116) 21757709
chr17 39699742 39701228 TCF7L2 GTRD no Colon (HCT116) 21757712
chr17 39699743 39700972 TCF7L2 GTRD no Colon (HCT116) 21757713
chr17 39699771 39701310 TCF7L2 GTRD no Colon (HCT116) 21757718
chr17 39700067 39701023 ZNF274 GTRD no Bone Marrow (K562) 21757723
chr17 39700162 39702124 ZBTB33 GTRD no Lung (A549) 21757726
chr17 39700464 39704411 ZBTB33 GTRD no Lung (A549) 21757727
chr17 39700464 39704411 ZBTB33 GTRD no Lung (A549) 108258733
chr17 39700464 39704411 ZBTB33 GTRD no Lung (A549) 108258734
chr17 39700585 39701029 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21757728
chr17 39700592 39701191 TCF7L2 GTRD no Colon (HCT116) 21757729
chr17 39700674 39700970 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21757730
chr17 39700745 39701249 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21757731
Genes associated with rs563568406[chr17:39700822], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More