EnhancerDB
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  3. rs563606909[chr17:48717864]
Enhancers that have rs563606909[chr17:48717864]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48713385 48720742 enh17222
Astrocyte Adrenal Pancreas Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Muscle (A673)
Transcript factors that have rs563606909[chr17:48717864]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48716754 48718836 AR GTRD no Prostate (PC-3) 21769879
chr17 48716754 48718836 AR GTRD no Prostate (PC-3) 108271045
chr17 48717853 48717874 IRF1 JASPAR yes 54710036
chr17 48717857 48717877 RREB1 JASPAR yes 54710037
chr17 48717860 48717866 TCF4 TRANSFAC yes 54710038
chr17 48717860 48717872 FOXI1 JASPAR yes 54710039
chr17 48717860 48717875 FOXP1 JASPAR yes 54710040
chr17 48717860 48717880 RREB1 JASPAR yes 54710041
chr17 48717861 48717881 RREB1 JASPAR yes 54710042
chr17 48717863 48717883 RREB1 JASPAR yes 54710043
chr17 48717864 48717876 FOXI1 JASPAR yes 54710044
Genes associated with rs563606909[chr17:48717864], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More