EnhancerDB
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  3. rs563610530[chr6:41685942]
Enhancers that have rs563610530[chr6:41685942]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41672005 41699742 enh9103
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs563610530[chr6:41685942]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41685924 41685944 RREB1 JASPAR yes 101668791
chr6 41685929 41685949 RREB1 JASPAR yes 101668794
chr6 41685930 41685951 IRF1 JASPAR yes 101668795
chr6 41685934 41685946 IRF1 JASPAR yes 101668796
chr6 41685937 41685957 RREB1 JASPAR yes 101668797
chr6 41685938 41685958 RREB1 JASPAR yes 101668798
chr6 41685939 41685943 YY1 TRANSFAC yes 101668799
chr6 41685941 41685947 TCF4 TRANSFAC yes 101668800
chr6 41685941 41685953 FOXI1 JASPAR yes 101668801
chr6 41685941 41685956 FOXP1 JASPAR yes 101668802
chr6 41685941 41685961 RREB1 JASPAR yes 101668803
chr6 41685942 41685962 RREB1 JASPAR yes 101668804
Genes associated with rs563610530[chr6:41685942], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More