-
Home
- SNP
- rs563721540[chr17:39953960]
Enhancers that have rs563721540[chr17:39953960]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
39947125 |
39957819 |
enh17155 |
|
|
Transcript factors that have rs563721540[chr17:39953960]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
39951896
|
39953988
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21758369
|
|
|
chr17
|
39952239
|
39954156
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21758374
|
|
|
chr17
|
39952346
|
39954000
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21758378
|
|
|
chr17
|
39953284
|
39954213
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21758394
|
|
|
chr17
|
39953946
|
39953961
|
FOXP1
|
JASPAR
|
yes
|
|
54277203
|
|
|
chr17
|
39953946
|
39953966
|
RREB1
|
JASPAR
|
yes
|
|
54277204
|
|
|
chr17
|
39953947
|
39953962
|
FOXP1
|
JASPAR
|
yes
|
|
54277205
|
|
|
chr17
|
39953947
|
39953967
|
RREB1
|
JASPAR
|
yes
|
|
54277206
|
|
|
chr17
|
39953948
|
39953963
|
FOXP1
|
JASPAR
|
yes
|
|
54277207
|
|
|
chr17
|
39953956
|
39953968
|
INSM1
|
JASPAR
|
yes
|
|
54277208
|
|
Genes associated with rs563721540[chr17:39953960], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |