EnhancerDB
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  3. rs563740517[chr1:201563200]
Enhancers that have rs563740517[chr1:201563200]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201559168 201580562 enh12524
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Breast Thyroid Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs563740517[chr1:201563200]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201561094 201563864 ZBTB33 GTRD no Brain (SK-N-SH) 21365074
chr1 201561469 201563577 ZBTB33 GTRD no Brain (SK-N-SH) 21365076
chr1 201561609 201563495 ZBTB33 GTRD no Brain (SK-N-SH) 21365077
chr1 201561738 201563427 ZBTB33 GTRD no Brain (SK-N-SH) 21365079
chr1 201561943 201563383 ZBTB33 GTRD no Brain (SK-N-SH) 21365080
chr1 201561986 201563360 ZBTB33 GTRD no Brain (SK-N-SH) 21365081
chr1 201562003 201563410 ZBTB33 GTRD no Brain (SK-N-SH) 21365082
chr1 201562028 201563536 ZBTB33 GTRD no Brain (SK-N-SH) 21365083
chr1 201562036 201563467 ZBTB33 GTRD no Brain (SK-N-SH) 21365084
chr1 201562037 201563405 ZBTB33 GTRD no Brain (SK-N-SH) 21365085
chr1 201562045 201563349 ZBTB33 GTRD no Brain (SK-N-SH) 21365086
chr1 201562095 201563344 ZBTB33 GTRD no Brain (SK-N-SH) 21365088
chr1 201562096 201563496 ZBTB33 GTRD no Brain (SK-N-SH) 21365089
chr1 201562102 201563291 ZBTB33 GTRD no Brain (SK-N-SH) 21365090
chr1 201562182 201563292 ZBTB33 GTRD no Brain (SK-N-SH) 21365093
chr1 201562184 201563691 ZBTB33 GTRD no Brain (SK-N-SH) 21365094
chr1 201562188 201563392 ZBTB33 GTRD no Brain (SK-N-SH) 21365096
chr1 201562702 201563296 ZBTB33 GTRD no Brain (SK-N-SH) 21365129
chr1 201563040 201563522 ZNF143 GTRD no Epithelial (MCF-7) 21365130
chr1 201563059 201564428 ZNF143 GTRD no Epithelial (MCF-7) 21365131
chr1 201563194 201563215 IRF1 JASPAR yes 34510950
chr1 201563196 201563211 PRDM1 JASPAR yes 34510951
chr1 201563196 201563211 STAT2 JASPAR yes 34510952
chr1 201563199 201563214 FOXP1 JASPAR yes 34510953
chr1 201563200 201563215 FOXP1 JASPAR yes 34510954
Genes associated with rs563740517[chr1:201563200], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More