EnhancerDB
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  3. rs563787778[chr19:14471466]
Enhancers that have rs563787778[chr19:14471466]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 14470665 14486095 enh5020
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs563787778[chr19:14471466]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 14470343 14477749 TCF7L2 GTRD no Colon (HCT116) 21853187
chr19 14470343 14477749 TCF7L2 GTRD no Colon (HCT116) 108391247
chr19 14470343 14477749 TCF7L2 GTRD no Colon (HCT116) 108391248
chr19 14471167 14473238 TCF7L2 GTRD no Colon (HCT116) 21853190
chr19 14471187 14471678 TCF7L2 GTRD no Colon (HCT116) 21853191
chr19 14471215 14471823 TCF7L2 GTRD no Colon (HCT116) 21853192
chr19 14471256 14476330 TCF7L2 GTRD no Colon (HCT116) 21853193
chr19 14471256 14476330 TCF7L2 GTRD no Colon (HCT116) 108391249
chr19 14471256 14476330 TCF7L2 GTRD no Colon (HCT116) 108391250
chr19 14471259 14473126 TCF7L2 GTRD no Colon (HCT116) 21853194
chr19 14471270 14473644 ZNF143 GTRD no Epithelial (MCF-7) 21853195
chr19 14471276 14471955 ZNF274 GTRD no Bone Marrow (K562) 21853196
chr19 14471286 14473799 TCF7L2 GTRD no Colon (HCT116) 21853197
chr19 14471286 14473799 TCF7L2 GTRD no Colon (HCT116) 108391251
chr19 14471326 14473767 ZNF274 GTRD no Bone Marrow (K562) 21853198
chr19 14471326 14473767 ZNF274 GTRD no Bone Marrow (K562) 108391252
chr19 14471378 14474449 ZNF143 GTRD no Epithelial (MCF-7) 21853199
chr19 14471378 14474449 ZNF143 GTRD no Epithelial (MCF-7) 108391253
chr19 14471378 14474449 ZNF143 GTRD no Epithelial (MCF-7) 108391254
chr19 14471403 14474338 TCF7L2 GTRD no Colon (HCT116) 21853200
chr19 14471403 14474338 TCF7L2 GTRD no Colon (HCT116) 108391255
chr19 14471403 14474338 TCF7L2 GTRD no Colon (HCT116) 108391256
chr19 14471427 14472003 TCF7L2 GTRD no Colon (HCT116) 21853201
chr19 14471445 14471466 IRF1 JASPAR yes 112565448
chr19 14471446 14471467 IRF1 JASPAR yes 112565450
chr19 14471450 14471471 IRF1 JASPAR yes 112565453
chr19 14471451 14471466 FOXP1 JASPAR yes 112565454
chr19 14471452 14471473 IRF1 JASPAR yes 112565455
chr19 14471454 14471468 SPIC JASPAR yes 112565456
chr19 14471454 14471468 STAT1 JASPAR yes 112565457
chr19 14471454 14471469 PRDM1 JASPAR yes 112565458
chr19 14471454 14471469 STAT2 JASPAR yes 112565459
chr19 14471456 14471477 IRF1 JASPAR yes 112565460
chr19 14471458 14473057 ZNF274 GTRD no Bone Marrow (K562) 21853202
chr19 14471463 14472893 ZNF274 GTRD no Bone Marrow (K562) 21853203
Genes associated with rs563787778[chr19:14471466], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More