EnhancerDB
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  3. rs563806820[chr1:16286278]
Enhancers that have rs563806820[chr1:16286278]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16272606 16295457 enh83
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Adrenal Blood (Karpas-422) Muscle (Myoblast) Uterus Thymus Heart
Transcript factors that have rs563806820[chr1:16286278]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16286261 16286282 IRF1 JASPAR yes 27018337
chr1 16286264 16286278 IRF7 JASPAR yes 27018339
chr1 16286266 16286278 IRF1 JASPAR yes 27018340
chr1 16286267 16286282 FOXP1 JASPAR yes 27018341
chr1 16286267 16286282 MEF2C JASPAR yes 27018342
chr1 16286267 16286288 IRF1 JASPAR yes 27018343
chr1 16286268 16286283 MEF2A JASPAR yes 27018344
chr1 16286269 16286281 FOXC2 JASPAR yes 27018345
chr1 16286269 16286281 MEF2A JASPAR yes 27018346
chr1 16286269 16286281 MEF2B JASPAR yes 27018347
chr1 16286269 16286281 MEF2D JASPAR yes 27018348
chr1 16286270 16286280 MEF2A JASPAR yes 27018349
chr1 16286271 16286286 FOXP1 JASPAR yes 27018350
chr1 16286277 16286283 TBP TRANSFAC yes 27018351
Genes associated with rs563806820[chr1:16286278], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More