EnhancerDB
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  3. rs563814579[chr12:49593108]
Enhancers that have rs563814579[chr12:49593108]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 49590445 49597955 enh2325
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Muscle (A673) Blood (Karpas-422) Muscle (Myoblast) Breast Spleen Uterus Thymus Heart
Transcript factors that have rs563814579[chr12:49593108]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 49593098 49593111 EOMES JASPAR yes 120763306
chr12 49593100 49593110 TBR1 JASPAR yes 120763307
chr12 49593100 49593111 TBX20 JASPAR yes 120763308
chr12 49593100 49593111 TBX2 JASPAR yes 120763309
chr12 49593101 49593111 TBX21 JASPAR yes 120763310
chr12 49593102 49593110 MGA JASPAR yes 120763311
chr12 49593102 49593110 TBX15 JASPAR yes 120763312
chr12 49593102 49593110 TBX1 JASPAR yes 120763313
chr12 49593102 49593110 TBX4 JASPAR yes 120763314
chr12 49593102 49593110 TBX5 JASPAR yes 120763315
chr12 49593106 49593118 YY1 JASPAR yes 120763316
Genes associated with rs563814579[chr12:49593108], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More