EnhancerDB
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  3. rs563861333[chr17:70429662]
Enhancers that have rs563861333[chr17:70429662]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs563861333[chr17:70429662]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70429647 70429662 FOXA1 JASPAR yes 55788000
chr17 70429651 70429666 MEF2A JASPAR yes 55788007
chr17 70429652 70429667 MEF2C JASPAR yes 55788008
chr17 70429653 70429665 MEF2A JASPAR yes 55788009
chr17 70429653 70429668 FOXA1 JASPAR yes 55788010
chr17 70429653 70429668 MEF2A JASPAR yes 55788011
chr17 70429654 70429666 FOXI1 JASPAR yes 55788012
chr17 70429655 70429667 FOXC2 JASPAR yes 55788013
chr17 70429655 70429667 MEF2A JASPAR yes 55788014
chr17 70429656 70429667 FOXB1 JASPAR yes 55788015
chr17 70429656 70429667 FOXC1 JASPAR yes 55788016
chr17 70429656 70429669 POU3F3 JASPAR yes 55788017
chr17 70429660 70429671 NFIL3 JASPAR yes 55788019
Genes associated with rs563861333[chr17:70429662], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More