EnhancerDB
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  3. rs563874949[chr5:171855071]
Enhancers that have rs563874949[chr5:171855071]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171850545 171880495 enh22807
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr5 171854785 171855084 vista50147
VISTA
Transcript factors that have rs563874949[chr5:171855071]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171855067 171855076 ZEB1 JASPAR yes 67788750
chr5 171855067 171855076 ZEB1 JASPAR yes 70761744
chr5 171855068 171855078 ID4 JASPAR yes 67788751
chr5 171855068 171855078 TCF3 JASPAR yes 67788752
chr5 171855068 171855078 TCF4 JASPAR yes 67788753
chr5 171855068 171855078 ID4 JASPAR yes 70761745
chr5 171855068 171855078 TCF3 JASPAR yes 70761746
chr5 171855068 171855078 TCF4 JASPAR yes 70761747
chr5 171855070 171855075 USF2 TRANSFAC yes 67788754
chr5 171855070 171855075 USF2 TRANSFAC yes 70761748
Genes associated with rs563874949[chr5:171855071], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More