EnhancerDB
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  3. rs563890938[chr3:188675087]
Enhancers that have rs563890938[chr3:188675087]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 188663255 188677255 enh21197
Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Prostate (RWPE1) Lung Heart
Transcript factors that have rs563890938[chr3:188675087]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 188675075 188675088 SMAD2 JASPAR yes 8533004
chr3 188675080 188675088 TBX15 JASPAR yes 8533005
chr3 188675080 188675089 ZEB1 JASPAR yes 8533006
chr3 188675081 188675091 FIGLA JASPAR yes 8533007
chr3 188675081 188675091 TCF4 JASPAR yes 8533008
chr3 188675083 188675088 USF2 TRANSFAC yes 8533009
Genes associated with rs563890938[chr3:188675087], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More