EnhancerDB
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  3. rs563949229[chr11:12181375]
Enhancers that have rs563949229[chr11:12181375]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 12175905 12217435 enh13777
Bone Marrow (K562) Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr11 12181262 12181458 vista9678
VISTA
Transcript factors that have rs563949229[chr11:12181375]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 12180871 12181449 CEBPB UCSC Txn Factor no Conserved 107958736
chr11 12181151 12181595 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107958737
chr11 12181174 12181550 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21471428
chr11 12181174 12181550 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107958738
chr11 12181175 12181531 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107958739
chr11 12181199 12181519 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21471429
chr11 12181199 12181519 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107958740
chr11 12181225 12181485 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21471430
chr11 12181225 12181485 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107958741
chr11 12181249 12181485 RAD21 UCSC Txn Factor no Conserved 107958742
chr11 12181263 12181431 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21471431
chr11 12181263 12181431 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107958743
chr11 12181272 12181488 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107958744
chr11 12181355 12181457 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107958745
chr11 12181370 12181384 GLIS3 JASPAR yes 37426777
chr11 12181370 12181384 GLIS3 JASPAR yes 114042720
Genes associated with rs563949229[chr11:12181375], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More