EnhancerDB
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  3. rs563960146[chr1:2214790]
Enhancers that have rs563960146[chr1:2214790]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2213745 2234616 enh11425
Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs563960146[chr1:2214790]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2214778 2214793 TFAP2A JASPAR yes 26231355
chr1 2214778 2214793 TFAP2C JASPAR yes 26231356
chr1 2214779 2214800 ZNF263 JASPAR yes 26231357
chr1 2214780 2214794 PLAG1 JASPAR yes 26231358
chr1 2214780 2214795 ZIC3 JASPAR yes 26231359
chr1 2214781 2214792 TFAP2A JASPAR yes 26231360
chr1 2214781 2214792 TFAP2B JASPAR yes 26231361
chr1 2214781 2214792 TFAP2C JASPAR yes 26231362
chr1 2214781 2214793 TFAP2A JASPAR yes 26231363
chr1 2214781 2214793 TFAP2B JASPAR yes 26231364
chr1 2214781 2214794 TFAP2B JASPAR yes 26231365
chr1 2214783 2214794 EBF1 JASPAR yes 26231366
chr1 2214786 2214796 ZNF740 JASPAR yes 26231367
chr1 2214787 2214797 ZNF740 JASPAR yes 26231368
chr1 2214787 2214802 NR2C2 JASPAR yes 26231369
chr1 2214788 2214798 SP1 JASPAR yes 26231370
chr1 2214788 2214798 ZNF740 JASPAR yes 26231371
chr1 2214790 2214800 SP1 JASPAR yes 26231372
Genes associated with rs563960146[chr1:2214790], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More