EnhancerDB
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  3. rs563988325[chr16:2177202]
Enhancers that have rs563988325[chr16:2177202]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 2169469 2181557 enh3844
Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Muscle (Myotube) Uterus Blood (T-cell) Heart
Transcript factors that have rs563988325[chr16:2177202]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 2174294 2182854 TCF7L2 GTRD no Colon (HCT116) 21684859
chr16 2174294 2182854 TCF7L2 GTRD no Colon (HCT116) 108172262
chr16 2177196 2177202 SP1 TRANSFAC yes 9171430
chr16 2177197 2177202 SP1 TRANSFAC yes 9171431
chr16 2177198 2177203 SP1 TRANSFAC yes 9171432
chr16 2177198 2177207 HIC2 JASPAR yes 9171433
chr16 2177201 2177205 LFA1 TRANSFAC yes 9171434
Genes associated with rs563988325[chr16:2177202], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More